napari_prism.pp.log1p

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napari_prism.pp.log1p#

napari_prism.pp.log1p(adata, copy=True, **kwargs)#

Apply log1p transformation (natural log transform with pseudocount) to a given layer or .X. Wraps sc.pp.log1p or rsc.pp.log1p.

Parameters:

  • adata (AnnData) – Anndata object.

  • copy (bool (default: True)) – Return a copy instead of writing inplace.

  • **kwargs – Additional keyword arguments to pass to pp.log1p.

Return type:

AnnData | None

Returns:

New AnnData object with log1p transformation applied. If copy is

False, modifies the AnnData object in place and returns None.

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